PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G191500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 105aa    MW: 11777.6 Da    PI: 7.441
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G191500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.11e-05801032855
                        CCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  28 PkaskapskKlsKaeiLekAveYIksLq 55 
                        P+     +k  + a++L ++veYIk+Lq
  Aqcoe7G191500.1.p  80 PN----MDKQTNTADMLDLVVEYIKELQ 103
                        33....4678*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.16E-677104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-678104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MPCFNLTFQS NEQNPEAGNQ TRNLTHHFSL PKTSVEMAAI LEFQDSVPCK IRAKRGCATH  60
PRSIAERVTT IYILTLALVP NMDKQTNTAD MLDLVVEYIK ELQK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265789.13e-39PREDICTED: transcription factor bHLH130-like isoform X1
RefseqXP_010265788.13e-39PREDICTED: transcription factor bHLH130-like isoform X1
RefseqXP_010265787.13e-39PREDICTED: transcription factor bHLH130-like isoform X1
RefseqXP_010265786.13e-39PREDICTED: transcription factor bHLH130-like isoform X1
RefseqXP_010265785.13e-39PREDICTED: transcription factor bHLH130-like isoform X1
SwissprotQ66GR39e-33BH130_ARATH; Transcription factor bHLH130
TrEMBLA0A067ETS36e-39A0A067ETS3_CITSI; Uncharacterized protein (Fragment)
STRINGPOPTR_0003s22290.12e-36(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-34bHLH family protein